Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
snaAPristinamycin IIA synthase subunit A. (448 aa)    
Predicted Functional Partners:
moxC_1
Putative monooxygenase MoxC.
 
     0.940
soxC
Dibenzothiophene desulfurization enzyme C.
  
  
 0.714
ssuA
Putative aliphatic sulfonates-binding protein.
 
  
 0.613
AMY53972.1
Hypothetical protein.
       0.556
ssuC_4
Putative aliphatic sulfonates transport permease protein SsuC.
 
  
 0.517
AMY53968.1
Hypothetical protein.
 
     0.504
ssuD_2
Alkanesulfonate monooxygenase.
 
  
0.466
nikA_2
Nickel-binding periplasmic protein.
  
   
 0.462
hsaB
Flavin-dependent monooxygenase, reductase subunit HsaB.
 
  
 0.447
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
  
 0.444
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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