Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknGSerine/threonine-protein kinase PknG. (827 aa)    
Predicted Functional Partners:
AMY53987.1
Hypothetical protein.
 
  
 0.991
glnH_1
ABC transporter glutamine-binding protein GlnH.
 
  
 0.990
garA
Glycogen accumulation regulator GarA.
   
 
 0.955
pstP
PP2C-family Ser/Thr phosphatase.
 
 
 0.714
mutT3
Putative 8-oxo-dGTP diphosphatase 3; Belongs to the Nudix hydrolase family.
     
 0.684
prrB
Sensor-type histidine kinase PrrB.
    
 
 0.654
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.636
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
      
 0.631
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.629
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
     
 0.629
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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