Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY54017.1Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (284 aa)    
Predicted Functional Partners:
psd_1
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 0.998
psd_2
Phosphatidylserine decarboxylase proenzyme.
 
 
 0.986
pgsA2
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.966
pgsA1
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.954
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.920
serB_2
Phosphoserine phosphatase.
    
  0.905
tdcB
L-threonine ammonia-lyase.
    
  0.901
ilvA
L-threonine dehydratase biosynthetic IlvA.
    
  0.901
cbs
Putative cystathionine beta-synthase.
   
 
  0.900
sdaA
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.900
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (22%) [HD]