Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpo_2Non-heme chloroperoxidase. (341 aa)    
Predicted Functional Partners:
AMY54096.1
Hypothetical protein.
       0.773
AMY51535.1
Arylesterase.
  
     0.701
bpoC_2
Putative non-heme bromoperoxidase BpoC.
  
     0.668
bpoC_1
Putative non-heme bromoperoxidase BpoC.
  
     0.654
rdmC
Aclacinomycin methylesterase RdmC.
  
   
 0.617
AMY54094.1
Putative HTH-type transcriptional regulator.
  
    0.604
hbhA
Heparin-binding hemagglutinin.
       0.602
yvaM_1
AB hydrolase superfamily protein YvaM.
  
     0.561
dehH1_2
Haloacetate dehalogenase H-1.
  
     0.538
ybfK
Carboxylesterase YbfK.
  
     0.537
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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