Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
znuC_2High-affinity zinc uptake system ATP-binding protein ZnuC. (216 aa)    
Predicted Functional Partners:
mntB_1
Manganese transport system membrane protein MntB.
 
 
 0.978
AMY54197.1
Putative periplasmic iron-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.963
mntB_2
Manganese transport system membrane protein MntB.
 
 
 0.942
AMY55903.1
Putative periplasmic iron-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.893
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 
 0.867
AMY54198.1
Hypothetical protein.
 
  
 0.793
ssaB
Manganese ABC transporter substrate-binding lipoprotein.
 
  
 0.790
AMY54196.1
Hypothetical protein.
 
  
 0.763
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
  
     0.556
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
   
 0.516
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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