Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pitALow-affinity inorganic phosphate transporter 1. (381 aa)    
Predicted Functional Partners:
AMY54204.1
Hypothetical protein.
 
    0.901
AMY54202.1
Hypothetical protein.
 
     0.876
menE
Putative 2-succinylbenzoate--CoA ligase.
  
    0.841
AMY54203.1
Hypothetical protein.
 
     0.805
nasF
Uroporphyrinogen-III C-methyltransferase.
  
  
 0.636
gltB_1
Glutamate synthase [NADPH] large chain.
  
  
 0.602
gltB_2
Glutamate synthase [NADPH] large chain.
  
  
 0.602
lysX
Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.595
pstB1
Phosphate import ATP-binding protein PstB 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.566
pstS3
Phosphate-binding protein PstS 3; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
 0.544
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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