Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY54476.1Baeyer-Villiger monooxygenase. (522 aa)    
Predicted Functional Partners:
sadH_2
Putative oxidoreductase SadH; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.941
lipR
Putative acetyl-hydrolase LipR.
  
 0.928
AMY54477.1
Putative HTH-type transcriptional regulator.
 
     0.824
ephD_4
Putative oxidoreductase EphD.
 
 
 0.496
ephD_3
Putative oxidoreductase EphD.
  
   0.430
fadR_2
Fatty acid metabolism regulator protein.
  
     0.422
fadJ
Fatty acid oxidation complex subunit alpha.
  
 
 
 0.417
tgs2
Putative diacylglycerol O-acyltransferase tgs2; Belongs to the long-chain O-acyltransferase family.
  
   0.409
fadB_3
Fatty acid oxidation complex subunit alpha.
  
 
 
 0.402
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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