Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY54499.1Long-chain-fatty-acid--CoA ligase FadD15. (595 aa)    
Predicted Functional Partners:
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
 
 0.956
lcfB_3
Long-chain-fatty-acid--CoA ligase.
 
 
0.866
lcfB_1
Long-chain-fatty-acid--CoA ligase.
 
 
0.865
fabH
3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
    
 0.814
accC_1
Biotin carboxylase.
  
 
 0.810
accC_2
Biotin carboxylase.
  
 
 0.810
ytpA_1
Phospholipase YtpA.
    
 0.805
accD6
Putative propionyl-CoA carboxylase beta chain 6.
    
 0.805
AMY55231.1
Long-chain-fatty-acid--CoA ligase FadD15.
  
  
 
0.804
bcd_2
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.622
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.