Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY54560.1Putative FAD-linked oxidoreductase. (460 aa)    
Predicted Functional Partners:
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 
 0.921
AMY51987.1
Putative 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.914
glcB_2
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.914
eda
KHG/KDPG aldolase.
   
 
 0.906
AMY53577.1
Putative FAD-linked oxidoreductase.
  
  
 
0.906
AMY54382.1
Putative FAD-linked oxidoreductase.
  
  
 
0.906
kdgA
KHG/KDPG aldolase.
   
 
 0.906
AMY55173.1
5'-nucleotidase.
    
 0.905
lysN_1
2-aminoadipate transaminase.
    
  0.904
lysN_4
2-aminoadipate transaminase.
    
  0.904
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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