Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY54562.1Putative peptidase; Belongs to the peptidase S51 family. (214 aa)    
Predicted Functional Partners:
AMY54563.1
Putative HIT-like protein.
  
    0.780
AMY55279.1
Hypothetical protein.
  
     0.741
AMY55708.1
Hypothetical protein.
  
     0.677
AMY54101.1
Hypothetical protein.
  
     0.642
AMY53899.1
Hypothetical protein.
  
     0.582
AMY54321.1
Hypothetical protein.
  
     0.566
pntAA
NAD(P) transhydrogenase subunit alpha part 1.
       0.529
pntA
NAD(P) transhydrogenase subunit alpha.
       0.528
pntB
NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.528
AMY53328.1
Hypothetical protein.
  
     0.514
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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