Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY54767.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
desK_4
Sensor histidine kinase DesK.
 
     0.625
AMY54768.1
Hypothetical protein.
       0.576
AMY54204.1
Hypothetical protein.
  
     0.551
AMY52838.1
Hypothetical protein.
  
     0.484
degU_5
Transcriptional regulatory protein DegU.
     
 0.484
AMY52427.1
Hypothetical protein.
  
     0.466
AMY52769.1
Hypothetical protein.
  
     0.461
AMY53131.1
Hypothetical protein.
  
     0.426
lytC_2
N-acetylmuramoyl-L-alanine amidase LytC.
 
  
 0.402
eccE1
ESX-1 secretion system protein EccE1.
  
     0.401
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.