Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ssuC_7Putative aliphatic sulfonates transport permease protein SsuC. (289 aa)    
Predicted Functional Partners:
thiY_2
Formylaminopyrimidine-binding protein.
 
 
 0.967
ssuB_2
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 0.963
cmpD_2
Bicarbonate transport ATP-binding protein CmpD.
 
 0.903
tauB
Taurine import ATP-binding protein TauB.
 
 0.872
thiY_1
Formylaminopyrimidine-binding protein.
 
 0.869
AMY51820.1
Putative thiamine biosynthesis protein.
 
 
 0.857
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.834
ssuA
Putative aliphatic sulfonates-binding protein.
 
 
 0.778
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
 
 0.736
AMY54774.1
Hypothetical protein.
 
 
 0.651
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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