Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pucR_4Purine catabolism regulatory protein. (569 aa)    
Predicted Functional Partners:
bar
Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.
 
     0.863
apc4_2
Acetophenone carboxylase delta subunit.
 
     0.777
AMY54806.1
Hypothetical protein.
 
     0.770
aam_2
Acylamidase; Belongs to the amidase family.
       0.714
cdhA_2
Caffeine dehydrogenase subunit alpha.
 
   
 0.699
apc3_2
Acetophenone carboxylase gamma subunit.
 
     0.645
kdhA_2
6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha.
 
   
 0.640
aam_3
Acylamidase.
       0.635
rutG_1
Putative pyrimidine permease RutG.
 
    0.581
accD3_3
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 
     0.546
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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