Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fprB_2Putative ferredoxin/ferredoxin--NADP reductase. (532 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase [NADPH] large chain.
 
 
 0.999
gltB_2
Glutamate synthase [NADPH] large chain.
  
 
 0.999
AMY54858.1
Hypothetical protein.
 
    0.894
nuoE
NADH-quinone oxidoreductase subunit E.
 
 
 0.841
nuoF
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 
 0.831
icd
Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family.
  
  
 0.794
AMY52564.1
Hypothetical protein.
 
    0.750
fprB_1
Putative ferredoxin/ferredoxin--NADP reductase.
  
 
 0.704
AMY51388.1
Stearoyl-CoA 9-desaturase electron transfer partner.
   
 0.684
AMY52243.1
Stearoyl-CoA 9-desaturase electron transfer partner.
   
 0.684
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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