Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cysJSulfite reductase [NADPH] flavoprotein alpha-component. (361 aa)    
Predicted Functional Partners:
sir
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.984
cysH_1
Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
 
 0.952
sbnA
Putative siderophore biosynthesis protein SbnA.
  
 
 0.944
cypE
Putative bifunctional P-450/NADPH-P450 reductase 2; Belongs to the cytochrome P450 family.
 
 
 
 0.935
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
0.915
metB
Cystathionine gamma-synthase.
  
 
 0.914
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.912
sseA
Putative thiosulfate sulfurtransferase SseA.
     
 0.906
AMY52124.1
Putative thiosulfate sulfurtransferase.
     
 0.906
sseB
Putative thiosulfate sulfurtransferase SseB.
     
 0.906
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (10%) [HD]