Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dag_2N-acyl-D-glutamate deacylase. (537 aa)    
Predicted Functional Partners:
AMY54882.1
D-threonine aldolase.
 
   
 0.977
kdgA
KHG/KDPG aldolase.
 
     0.903
gntU
Low-affinity gluconate transporter.
 
     0.844
ridA
2-iminobutanoate/2-iminopropanoate deaminase.
 
   
 0.757
kdgK_3
2-dehydro-3-deoxygluconokinase.
 
   
 0.718
kdgR_2
Transcriptional regulator KdgR.
 
     0.628
abgB
P-aminobenzoyl-glutamate hydrolase subunit B; Belongs to the peptidase M20A family.
 
     0.485
nfdA_2
N-substituted formamide deformylase.
 
     0.419
iaaM
Tryptophan 2-monooxygenase.
      
 0.403
nfdA_1
N-substituted formamide deformylase.
 
     0.402
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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