Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
proP_5Proline/betaine transporter. (454 aa)    
Predicted Functional Partners:
idnD
L-idonate 5-dehydrogenase (NAD(P)(+)).
  
    0.679
por_2
Polyol:NADP oxidoreductase; Belongs to the mannitol dehydrogenase family.
     
 0.620
hprA_2
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
   0.617
degA_1
HTH-type transcriptional regulator DegA.
     
 0.615
AMY54967.1
D-galactonate dehydratase family member.
       0.614
slyA_1
Transcriptional regulator SlyA.
      
 0.566
ydhF
Oxidoreductase YdhF.
       0.421
AMY52290.1
Putative enoyl-CoA hydratase 1.
   
  
 0.413
AMY55744.1
Putative enoyl-CoA hydratase 1.
   
  
 0.413
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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