Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
desR_3Transcriptional regulatory protein DesR. (202 aa)    
Predicted Functional Partners:
desK_5
Sensor histidine kinase DesK.
 
 0.998
desK_2
Sensor histidine kinase DesK.
 
 0.984
AMY55123.1
Hypothetical protein.
 
   
 0.914
drrA_8
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
    0.912
AMY55523.1
Hypothetical protein.
  
 
 0.908
desR_1
Transcriptional regulatory protein DesR.
  
  
 
0.906
desK_6
Sensor histidine kinase DesK.
 
 
 0.838
nreB_1
Oxygen sensor histidine kinase NreB.
 
 
 0.832
desK_3
Sensor histidine kinase DesK.
 
 
 0.831
desK_1
Sensor histidine kinase DesK.
 
 
 0.829
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.