Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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baeB_3Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. (257 aa)    
Predicted Functional Partners:
uvrA_3
UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.657
AMY55372.1
Hypothetical protein.
       0.546
soxA
Sarcosine oxidase subunit alpha.
  
 0.457
fadH
2,4-dienoyl-CoA reductase [NADPH].
   
 0.428
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
 
 
 0.426
moeZ_2
Putative adenylyltransferase/sulfurtransferase MoeZ.
 
 
 0.426
AMY53918.1
Hypothetical protein.
  
     0.420
AMY55644.1
Hypothetical protein.
  
     0.416
thcD_1
Rhodocoxin reductase.
   
 0.413
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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