Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pknA_2Serine/threonine-protein kinase PknA. (443 aa)    
Predicted Functional Partners:
pstP
PP2C-family Ser/Thr phosphatase.
 
 
 0.893
garA
Glycogen accumulation regulator GarA.
 
 
 
 0.882
pao
Pseudooxynicotine oxidase.
  
    0.676
pknL_1
Serine/threonine-protein kinase PknL.
 
 
0.655
pknB
Serine/threonine-protein kinase PknB.
 
 
0.653
fhaB
FHA domain-containing protein FhaB.
 
 
 
 0.593
AMY55459.1
Hypothetical protein; Cypemycin N-terminal methyltransferase.
       0.535
fhaA
FHA domain-containing protein FhaA.
 
 
 
 0.531
todS
Sensor histidine kinase TodS.
  
 
 0.480
AMY55523.1
Hypothetical protein.
  
 
 0.471
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.