Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMY55459.1Hypothetical protein; Cypemycin N-terminal methyltransferase. (230 aa)    
Predicted Functional Partners:
prpE
Bis(5'-nucleosyl)-tetraphosphatase PrpE.
   
   0.578
ykuI
Putative EAL-domain containing protein YkuI.
  
  
 0.573
pknA_2
Serine/threonine-protein kinase PknA.
       0.535
AMY51806.1
Hypothetical protein.
  
 0.524
nicC
6-hydroxynicotinate 3-monooxygenase.
  
 0.524
hpxO
FAD-dependent urate hydroxylase.
  
 0.524
tfdB
2,4-dichlorophenol 6-monooxygenase.
  
 0.524
AMY53221.1
Hypothetical protein; Belongs to the UPF0311 family.
  
 0.524
mhpA
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
  
 0.524
pobA
P-hydroxybenzoate hydroxylase.
  
 0.524
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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