Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
carCarboxylic acid reductase. (1181 aa)    
Predicted Functional Partners:
ppsA
Phthiocerol synthesis polyketide synthase type I PpsA.
 
  
 0.962
mas
Mycocerosic acid synthase.
 
 
 0.918
tycC_3
Tyrocidine synthase 3.
 
  
 0.893
dhbF_1
Dimodular nonribosomal peptide synthase.
  
  
 0.877
tycC_1
Tyrocidine synthase 3.
  
  
 0.877
dhbF_3
Dimodular nonribosomal peptide synthase.
  
  
 0.877
lgrD_4
Linear gramicidin synthase subunit D.
  
  
 0.877
mbtB
Phenyloxazoline synthase MbtB.
 
  
 0.858
lgrD_3
Linear gramicidin synthase subunit D.
 
  
0.842
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
 
 0.804
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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