Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pgsA1Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (201 aa)    
Predicted Functional Partners:
AMY54017.1
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.954
pgsA2
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
0.931
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
 0.922
AMY55477.1
Hypothetical protein.
     
 0.881
AMY55479.1
Hypothetical protein.
     
 0.881
AMY55478.1
Hypothetical protein.
       0.879
gcvH_2
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
    0.852
cinA_1
CinA-like protein; Belongs to the CinA family.
  
  
 0.806
nudL_2
Putative Nudix hydrolase NudL; Belongs to the Nudix hydrolase family.
       0.770
AMY55482.1
Putative HTH-type transcriptional regulator.
 
     0.578
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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