Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ybaLInner membrane protein YbaL; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (545 aa)    
Predicted Functional Partners:
ktrB
Ktr system potassium uptake protein B.
  
 
 0.846
mrpA
Na(+)/H(+) antiporter subunit A.
     
 0.666
AMY55670.1
Putative methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.662
moaE2_2
Molybdopterin synthase catalytic subunit 2.
  
    0.577
AMY53765.1
Hypothetical protein.
  
  
 0.448
AMY55531.1
Hypothetical protein.
       0.443
AMY52030.1
Hypothetical protein.
  
  
 0.439
mscL
Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
     
 0.433
todS
Sensor histidine kinase TodS.
  
  
 0.433
cysG
Siroheme synthase.
  
  
 0.431
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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