Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutIImidazolonepropionase. (531 aa)    
Predicted Functional Partners:
AMY55540.1
Hypothetical protein.
  
  
 0.943
lnt_1
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.900
liaR_2
Transcriptional regulatory protein LiaR.
       0.623
AMY55987.1
Hypothetical protein.
  
     0.567
desK_6
Sensor histidine kinase DesK.
       0.561
AMY55682.1
Hypothetical protein.
 
     0.561
AMY55543.1
Hypothetical protein.
       0.538
AMY55861.1
Hypothetical protein.
  
     0.497
tldD
Metalloprotease TldD.
       0.468
AMY55545.1
Hypothetical protein.
       0.468
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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