trmI protein (Rhodococcus fascians D188) - STRING interaction network

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trmI

tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (349 aa)

Predicted Functional Partners:

trmB

0.881

yniC

0.771

rpmD

0.667

AMY55575.1

0.665

AMY55574.1

0.643

AMY55484.1

0.633

AMY55768.1

0.629

rpoZ

0.602

whiB1

0.576

whmD

0.575

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMY55484.1	rpoZ	A3L23_04176	A3L23_04369	Putative HTH-type transcriptional regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.837
AMY55484.1	trmI	A3L23_04176	A3L23_04265	Putative HTH-type transcriptional regulator.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.633
AMY55484.1	whiB1	A3L23_04176	A3L23_00016	Putative HTH-type transcriptional regulator.	Transcriptional regulator WhiB1; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.	0.772
AMY55484.1	whmD	A3L23_04176	A3L23_00046	Putative HTH-type transcriptional regulator.	Transcriptional regulator WhiB2; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.	0.780
AMY55574.1	AMY55575.1	A3L23_04266	A3L23_04267	Hypothetical protein.	Hypothetical protein.	0.879
AMY55574.1	trmI	A3L23_04266	A3L23_04265	Hypothetical protein.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.643
AMY55575.1	AMY55574.1	A3L23_04267	A3L23_04266	Hypothetical protein.	Hypothetical protein.	0.879
AMY55575.1	trmI	A3L23_04267	A3L23_04265	Hypothetical protein.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.665
AMY55768.1	trmB	A3L23_04465	A3L23_01407	Putative RNA methyltransferase/cg2084; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.572
AMY55768.1	trmI	A3L23_04465	A3L23_04265	Putative RNA methyltransferase/cg2084; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.629
rpmD	rpoZ	A3L23_00234	A3L23_04369	50S ribosomal protein L30.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.889
rpmD	trmB	A3L23_00234	A3L23_01407	50S ribosomal protein L30.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.616
rpmD	trmI	A3L23_00234	A3L23_04265	50S ribosomal protein L30.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.667
rpoZ	AMY55484.1	A3L23_04369	A3L23_04176	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Putative HTH-type transcriptional regulator.	0.837
rpoZ	rpmD	A3L23_04369	A3L23_00234	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	50S ribosomal protein L30.	0.889
rpoZ	trmI	A3L23_04369	A3L23_04265	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.	0.602
rpoZ	whiB1	A3L23_04369	A3L23_00016	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator WhiB1; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.	0.767
rpoZ	whmD	A3L23_04369	A3L23_00046	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator WhiB2; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.	0.925
trmB	AMY55768.1	A3L23_01407	A3L23_04465	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	Putative RNA methyltransferase/cg2084; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.572
trmB	rpmD	A3L23_01407	A3L23_00234	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	50S ribosomal protein L30.	0.616

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