Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmuU_4Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (355 aa)    
Predicted Functional Partners:
hmuV_2
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.987
hmuT
Hemin-binding periplasmic protein HmuT.
 
 
 0.983
fhuC_3
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.898
hmuV_1
Hemin import ATP-binding protein HmuV.
 
 
 0.892
fhuC_2
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.873
fhuC_1
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.863
yusV_1
Putative siderophore transport system ATP-binding protein YusV.
 
 
 0.838
yusV_2
Putative siderophore transport system ATP-binding protein YusV.
 
 
 0.833
yhdN_5
General stress protein 69.
       0.795
yfmC_4
Fe(3+)-citrate-binding protein YfmC.
 
 
 0.708
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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