Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY55605.1Putative trans-acting enoyl reductase. (421 aa)    
Predicted Functional Partners:
yfdE_3
Acetyl-CoA:oxalate CoA-transferase; Belongs to the CoA-transferase III family.
  
    0.802
gshA
Glutamate--cysteine ligase.
 
     0.729
inhA_2
Enoyl-[acyl-carrier-protein] reductase [NADH].
      
 0.625
acpM
Meromycolate extension acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
      
 0.616
gatA_4
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
  
 0.608
ycgJ_2
Putative methyltransferase YcgJ.
  
  
 0.577
AMY55603.1
Hypothetical protein.
     
 0.535
ethA_2
FAD-containing monooxygenase EthA.
 
   
 0.500
ethA_1
FAD-containing monooxygenase EthA.
 
   
 0.472
lipR
Putative acetyl-hydrolase LipR.
  
 
  0.466
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.