ku protein (Rhodococcus fascians D188) - STRING interaction network

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ku

Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (323 aa)

Predicted Functional Partners:

AMY52902.1

0.975

ligC

0.919

AMY52872.1

0.884

AMY54041.1

0.884

ligB

0.805

crtL

0.800

fabG_14

0.665

ybiT_1

0.500

AMY52971.1

0.414

uvrD1

0.403

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMY52872.1	ku	A3L23_01522	A3L23_04327	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.884
AMY52872.1	ligB	A3L23_01522	A3L23_03226	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	DNA ligase B.	0.669
AMY52872.1	ligC	A3L23_01522	A3L23_01523	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	DNA ligase C1.	0.994
AMY52902.1	AMY52971.1	A3L23_01552	A3L23_01622	Hypothetical protein; Multifunctional non-homologous end joining DNA repair protein LigD.	Hypothetical protein.	0.574
AMY52902.1	ku	A3L23_01552	A3L23_04327	Hypothetical protein; Multifunctional non-homologous end joining DNA repair protein LigD.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.975
AMY52971.1	AMY52902.1	A3L23_01622	A3L23_01552	Hypothetical protein.	Hypothetical protein; Multifunctional non-homologous end joining DNA repair protein LigD.	0.574
AMY52971.1	AMY54041.1	A3L23_01622	A3L23_02704	Hypothetical protein.	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	0.497
AMY52971.1	ku	A3L23_01622	A3L23_04327	Hypothetical protein.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.414
AMY52971.1	ligB	A3L23_01622	A3L23_03226	Hypothetical protein.	DNA ligase B.	0.418
AMY54041.1	AMY52971.1	A3L23_02704	A3L23_01622	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	Hypothetical protein.	0.497
AMY54041.1	ku	A3L23_02704	A3L23_04327	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.884
AMY54041.1	ligB	A3L23_02704	A3L23_03226	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	DNA ligase B.	0.752
AMY54041.1	ligC	A3L23_02704	A3L23_01523	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	DNA ligase C1.	0.975
crtL	fabG_14	A3L23_04326	A3L23_04325	Lycopene beta cyclase.	3-oxoacyl-[acyl-carrier-protein] reductase FabG.	0.854
crtL	ku	A3L23_04326	A3L23_04327	Lycopene beta cyclase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.800
crtL	ybiT_1	A3L23_04326	A3L23_04324	Lycopene beta cyclase.	Putative ABC transporter ATP-binding protein YbiT.	0.622
fabG_14	crtL	A3L23_04325	A3L23_04326	3-oxoacyl-[acyl-carrier-protein] reductase FabG.	Lycopene beta cyclase.	0.854
fabG_14	ku	A3L23_04325	A3L23_04327	3-oxoacyl-[acyl-carrier-protein] reductase FabG.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.665
fabG_14	ybiT_1	A3L23_04325	A3L23_04324	3-oxoacyl-[acyl-carrier-protein] reductase FabG.	Putative ABC transporter ATP-binding protein YbiT.	0.578
ku	AMY52872.1	A3L23_04327	A3L23_01522	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Hypothetical protein; Multifunctional non-homologous end joining protein LigD.	0.884

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