Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
dorADimethyl sulfoxide/trimethylamine N-oxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (773 aa)    
Predicted Functional Partners:
birA
Bifunctional ligase/repressor BirA.
     
 0.901
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
     
  0.900
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
 0.880
cld
Chlorite dismutase.
       0.879
hemY
Protoporphyrinogen oxidase.
       0.879
yjjG
Pyrimidine 5'-nucleotidase YjjG.
       0.790
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
 
 0.782
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.773
AMY55750.1
Hypothetical protein.
       0.706
fdnI
Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit.
  
 
 0.558
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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