Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaJ_23-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (408 aa)    
Predicted Functional Partners:
fadB_5
Fatty acid oxidation complex subunit alpha.
 
 0.998
fadB_3
Fatty acid oxidation complex subunit alpha.
  
 0.996
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.996
hbd_1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.972
AMY53492.1
Hypothetical protein.
  
 0.965
bbsG_1
(R)-benzylsuccinyl-CoA dehydrogenase.
  
 0.954
mmgC_3
Acyl-CoA dehydrogenase.
  
 0.954
mmgC_4
Acyl-CoA dehydrogenase.
  
 0.954
AMY55925.1
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.954
bcd_2
Acyl-CoA dehydrogenase, short-chain specific.
  
 0.954
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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