sigA protein (Rhodococcus fascians D188) - STRING interaction network

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sigA

RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (442 aa)

Predicted Functional Partners:

rpoB

0.975

rpoA

0.962

rpoC

0.954

rbpA

0.909

rpoZ

0.897

carD

0.884

whiA

0.807

whmD

0.790

bmrR_2

0.774

bmrR_3

0.774

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
bmrR_2	rpoA	A3L23_01767	A3L23_00223	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.835
bmrR_2	rpoB	A3L23_01767	A3L23_02932	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
bmrR_2	rpoC	A3L23_01767	A3L23_02933	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.832
bmrR_2	rpoZ	A3L23_01767	A3L23_04369	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.833
bmrR_2	sigA	A3L23_01767	A3L23_04479	Multidrug-efflux transporter 1 regulator.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.774
bmrR_3	rpoA	A3L23_01929	A3L23_00223	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.835
bmrR_3	rpoB	A3L23_01929	A3L23_02932	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
bmrR_3	rpoC	A3L23_01929	A3L23_02933	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.832
bmrR_3	rpoZ	A3L23_01929	A3L23_04369	Multidrug-efflux transporter 1 regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.833
bmrR_3	sigA	A3L23_01929	A3L23_04479	Multidrug-efflux transporter 1 regulator.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.774
carD	rbpA	A3L23_02534	A3L23_04225	RNA polymerase-binding transcription factor CarD.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.975
carD	rpoA	A3L23_02534	A3L23_00223	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.946
carD	rpoB	A3L23_02534	A3L23_02932	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.964
carD	rpoC	A3L23_02534	A3L23_02933	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
carD	rpoZ	A3L23_02534	A3L23_04369	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.957
carD	sigA	A3L23_02534	A3L23_04479	RNA polymerase-binding transcription factor CarD.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.884
rbpA	carD	A3L23_04225	A3L23_02534	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	RNA polymerase-binding transcription factor CarD.	0.975
rbpA	rpoA	A3L23_04225	A3L23_00223	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.948
rbpA	rpoB	A3L23_04225	A3L23_02932	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
rbpA	rpoC	A3L23_04225	A3L23_02933	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963

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