Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY55821.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
     
 0.776
AMY54593.1
Hypothetical protein.
  
     0.666
AMY54467.1
Hypothetical protein.
  
     0.637
AMY55708.1
Hypothetical protein.
  
     0.612
AMY54654.1
Hypothetical protein.
  
     0.532
AMY54893.1
Hypothetical protein.
  
     0.524
AMY53084.1
Hypothetical protein.
  
     0.492
AMY55789.1
Hypothetical protein.
  
     0.476
AMY51542.1
Hypothetical protein.
  
     0.470
AMY54178.1
Hypothetical protein.
  
     0.448
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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