Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfp6Low molecular weight protein antigen 6. (186 aa)    
Predicted Functional Partners:
ilvD_2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.792
AMY54220.1
Hypothetical protein.
  
     0.773
AMY51370.1
Hypothetical protein.
  
     0.771
AMY52088.1
Hypothetical protein.
  
     0.768
AMY54438.1
Hypothetical protein.
  
     0.768
AMY56159.1
Hypothetical protein.
  
     0.767
AMY53923.1
Hypothetical protein.
  
     0.766
AMY53315.1
Hypothetical protein.
  
     0.765
AMY54354.1
Hypothetical protein.
  
     0.765
AMY54918.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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