Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
iscSIscS-like cysteine desulfurase. (412 aa)    
Predicted Functional Partners:
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 0.997
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
   
 0.981
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.954
sseA
Putative thiosulfate sulfurtransferase SseA.
  
 0.926
AMY52124.1
Putative thiosulfate sulfurtransferase.
  
 0.926
sseB
Putative thiosulfate sulfurtransferase SseB.
  
 0.922
erpA
Iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
 
 
 0.907
AMY56054.1
Hypothetical protein.
     
 0.884
sufC
Vegetative protein 296.
  
  
 0.821
moeZ_2
Putative adenylyltransferase/sulfurtransferase MoeZ.
   
 0.819
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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