Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein subunit beta. (266 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein subunit alpha.
 0.999
acdA_6
Acyl-CoA dehydrogenase.
 
 
 0.887
AMY52834.1
Putative acyl-CoA dehydrogenase fadE25.
 
 
 0.884
acdA_3
Acyl-CoA dehydrogenase.
 
 
 0.877
mmgC_7
Acyl-CoA dehydrogenase.
 
 
 0.864
acdA_4
Acyl-CoA dehydrogenase.
 
 
 0.861
mmgC_5
Acyl-CoA dehydrogenase.
 
 
 0.848
mmgC_4
Acyl-CoA dehydrogenase.
 
 
 0.847
acdA_8
Acyl-CoA dehydrogenase.
 
 
 0.847
mmgC_3
Acyl-CoA dehydrogenase.
 
 
 0.845
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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