Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kstRHTH-type transcriptional repressor KstR. (195 aa)    
Predicted Functional Partners:
AMY56086.1
Chromate reductase.
 
   
 0.873
AMY54588.1
Putative HTH-type transcriptional regulator.
  
    0.809
AMY53581.1
Putative HTH-type transcriptional regulator.
   
    0.764
ywtF
Putative transcriptional regulator YwtF.
  
    0.722
cdhR_2
HTH-type transcriptional regulator CdhR.
   
    0.715
AMY53240.1
Putative HTH-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
   0.709
kdpE_2
Transcriptional regulatory protein KdpE.
   
    0.697
fadR_4
Fatty acid metabolism regulator protein.
  
    0.645
AMY55303.1
Hypothetical protein.
 
     0.640
bm3R1_2
HTH-type transcriptional repressor Bm3R1.
  
   
0.628
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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