Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY56101.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
AMY56105.1
Hypothetical protein.
     0.987
AMY56104.1
Hypothetical protein.
 
     0.970
cfa
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.966
AMY56102.1
Putative fatty acid methyltransferase.
 
     0.952
AMY56106.1
Hypothetical protein.
 
     0.908
pgm
Phosphoglucomutase.
       0.599
tetA
Tetracycline resistance protein, class C.
       0.577
pknE_2
Serine/threonine-protein kinase PknE.
       0.516
AMY52237.1
Hypothetical protein.
  
     0.432
pcaA
Cyclopropane mycolic acid synthase 3.
 
     0.420
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.