Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMY56102.1Putative fatty acid methyltransferase. (441 aa)    
Predicted Functional Partners:
AMY56105.1
Hypothetical protein.
  
 0.994
AMY56104.1
Hypothetical protein.
  
 0.988
AMY56101.1
Hypothetical protein.
 
     0.952
AMY56106.1
Hypothetical protein.
 
     0.904
cfa
Cyclopropane-fatty-acyl-phospholipid synthase.
 
    
0.862
tetA
Tetracycline resistance protein, class C.
     
 0.566
pgm
Phosphoglucomutase.
       0.563
pknE_2
Serine/threonine-protein kinase PknE.
       0.503
dprE1_2
FAD-dependent decaprenylphosphoryl-beta-D-ribofuranose 2-oxidase.
 
    0.432
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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