Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bcd_2Acyl-CoA dehydrogenase, short-chain specific. (406 aa)    
Predicted Functional Partners:
acrC_2
Acryloyl-CoA reductase (NADH).
 
  
0.972
paaJ_2
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.954
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.945
fadB_3
Fatty acid oxidation complex subunit alpha.
 
 0.937
AMY53502.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
  
 
 0.930
mmgC_4
Acyl-CoA dehydrogenase.
  
  
 
0.928
pdhC_1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.926
bkdC
Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex.
   
 0.926
acdA_6
Acyl-CoA dehydrogenase.
  
  
 
0.923
acdA_1
Acyl-CoA dehydrogenase.
  
  
 
0.920
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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