Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lipVLipase LipV. (258 aa)    
Predicted Functional Partners:
atl
DNA base-flipping protein.
 
     0.903
AMY56143.1
Putative esterase.
     
 0.792
pcrA_2
ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
       0.764
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.753
pcrA_1
ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
       0.736
AMY53862.1
2-(acetamidomethylene)succinate hydrolase.
  
     0.698
mmgC_1
Acyl-CoA dehydrogenase.
  
  0.463
plsB1
Putative acyltransferase plsB1; Belongs to the GPAT/DAPAT family.
  
  
 0.451
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
 
  
 0.444
sodC
Cu-Zn superoxide dismutase.
  
 
 0.440
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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