Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nasD_2Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (831 aa)    
Predicted Functional Partners:
nirD
Nitrite reductase (NADH) small subunit.
 
 
 0.997
narK
Nitrate/nitrite transporter NarK.
 
 
 0.991
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
 
 
 0.957
glnA_3
Glutamine synthetase 1.
    
 0.933
gdhA
NAD(P)-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.919
glnA_2
Putative glutamine synthetase 2.
    
 0.919
gms
Glutamate--methylamine ligase; Belongs to the glutamine synthetase family.
    
 0.918
nasD_1
Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 
0.917
amdA
Acetamidase.
  
  
  0.911
glnA_1
Glutamine synthetase.
  
 
 0.907
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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