STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJW45719.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
uraH
5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.949
AJW45724.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.845
AJW45723.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
    0.793
AJW45714.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
AJW45713.1
FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
AJW45715.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
AJW45717.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.665
AJW46348.1
Hydroxydechloroatrazine ethylaminohydrolase; Catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.474
AJW45721.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.463
Your Current Organism:
Ralstonia mannitolilytica
NCBI taxonomy Id: 105219
Other names: CCUG 38408, CCUG 45027, DSM 17512, JCM 11284, LMG 6866, LMG:6866, NCIMB 10805, Pseudomonas thomasii, R. mannitolilytica, Ralstonia mannitolilytica corrig. De Baere et al. 2001, Ralstonia mannitolytica, Ralstonia thomasii
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