Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJW44119.1 | AJW45850.1 | TK49_04965 | TK49_14795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
AJW45850.1 | AJW44119.1 | TK49_14795 | TK49_04965 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
AJW45850.1 | guaA | TK49_14795 | TK49_11305 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.534 |
AJW45850.1 | ybeY | TK49_14795 | TK49_05735 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.432 |
guaA | AJW45850.1 | TK49_11305 | TK49_14795 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |
ybeY | AJW45850.1 | TK49_05735 | TK49_14795 | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |