STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000010210Calcium channel-related. (788 aa)    
Predicted Functional Partners:
KFL_000670380
Flagellar associated protein.
    
 0.837
KFL_005540050
Intraflagellar transport protein 122.
   
 0.835
KFL_000880240
Uncharacterized protein.
    
 0.832
KFL_006550030
VWFA domain-containing protein.
   
 0.783
KFL_006550020
VWFA domain-containing protein.
   
 0.783
KFL_000050465
Uncharacterized protein.
    
  0.780
KFL_000050460
WD_REPEATS_REGION domain-containing protein.
    
  0.780
KFL_006890060
Intraflagellar transport protein 80 homolog.
    
 0.715
KFL_000860350
Uncharacterized protein.
    
 0.675
KFL_000930050
Uncharacterized protein.
    
 0.622
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.