STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000060380Translocon at the inner envelope membrane of chloroplast TIC55. (524 aa)    
Predicted Functional Partners:
KFL_008910050
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.838
KFL_001100180
Rieske domain-containing protein.
  
 
 0.712
KFL_002870080
Monodehydroascorbate reductase.
  
 
 0.647
KFL_001690160
Monodehydroascorbate reductase.
  
 
 0.647
KFL_001960050
Monodehydroascorbate reductase.
  
 
 0.647
KFL_004330100
Rieske domain-containing protein.
  
 
 0.647
KFL_003140050
NADH:flavin oxidoreductase or 12-oxophytodienoate reductase.
  
 
 0.639
KFL_006470050
12-oxophytodienoic acid reductase 3.
  
 
 0.639
KFL_000970380
Lactamase_B domain-containing protein.
  
 
 0.637
KFL_000170060
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.637
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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