STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000060890Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
KFL_002210090
MRG domain-containing protein.
   
 0.979
KFL_001920160
Phosphatidylinositol 3-and 4-kinase family protein with FAT domain; Belongs to the PI3/PI4-kinase family.
    
 0.979
KFL_005600070
SANT_DAMP1_like domain-containing protein.
    
 0.979
KFL_007060050
Enhancer of polycomb-like protein.
    
 0.978
KFL_002130020
Uncharacterized protein.
    
 0.977
KFL_002920120
DNA-binding protein.
   
 0.970
KFL_006030040
Actin-related protein 4-ARP4; Belongs to the actin family.
    
 0.965
KFL_003190060
RuvB-like helicase; Belongs to the RuvB family.
    
 0.963
KFL_002100140
Putative SNF2 family N-terminal domain containing protein.
    
 0.945
KFL_002030120
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.933
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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