STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000920300Protein YIPF. (276 aa)    
Predicted Functional Partners:
KFL_000830190
Protein YIPF.
   
 
 0.953
KFL_000760040
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.862
KFL_001720070
Uncharacterized protein.
   
 
 0.700
KFL_000110320
Glycosyl hydrolases family 16.
    
  0.533
KFL_001090220
SORTING NEXIN.
    
  0.533
KFL_000360250
Sorting nexins and related PX domain-containing proteins.
    
  0.533
KFL_001870105
Uncharacterized protein.
 
      0.505
KFL_000600210
Uncharacterized protein.
   
 
 0.460
KFL_000100490
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.417
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.