STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000970240Peptidylprolyl isomerase. (279 aa)    
Predicted Functional Partners:
KFL_003630120
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.781
KFL_002910060
Ribosome biogenesis protein.
   
   0.740
KFL_005650020
CS domain-containing protein.
   
 0.679
KFL_000470160
Brix domain-containing protein.
   
   0.675
KFL_001060260
Uncharacterized protein.
   
   0.642
KFL_000810310
Eukaryotic translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.632
KFL_000020530
Molecular chaperone HtpG.
   
 0.626
KFL_000370210
Heat shock protein.
   
 0.626
KFL_000800140
Heat shock protein.
   
 0.626
KFL_004730010
SH3 domain-containing protein.
   
 0.626
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.