STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001330100Malate dehydrogenase. (422 aa)    
Predicted Functional Partners:
KFL_000350380
Citrate synthase.
  
 0.976
KFL_000090420
Citrate synthase; Belongs to the citrate synthase family.
  
 0.976
KFL_000610040
Aspartate aminotransferase.
   
 0.952
KFL_000790350
Aspartate aminotransferase.
   
 0.944
KFL_000340200
Aspartate aminotransferase.
   
 0.944
KFL_001360150
Fumarase.
  
 0.941
KFL_003220160
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.938
KFL_002990060
Malic enzyme.
  
 0.937
KFL_000090230
Malate synthase; Belongs to the malate synthase family.
   
 0.936
KFL_000320370
Malate dehydrogenase (NADP+).
   
 0.936
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.